Saturday, March 1, 2014

Ha71 HAPLOGROUPS


Origin[edit]

Haplogroup H is a descendant of haplogroup HV. The Cambridge Reference Sequence (CRS), the human mitochondrial sequence to which all other sequences are compared, belongs to haplogroup H2a2a. Several independent studies conclude that haplogroup H probably evolved in West Asia c. 25,000 years ago. It was carried to Europe by migrations c. 20-25,000 years ago, and spread with population of the southwest of the continent.[3][4] Its arrival was roughly contemporary with the rise of the Gravettian culture. The spread of subclades H1, H3 and the sisterhaplogroup V reflect a second intra-European expansion from the Franco-Cantabrian region after the last glacial maximum, c. 13,000 years ago.[1][3]

In July 2008 ancient mtDNA from an individual called Paglicci 23, whose remains were dated to 25,000 years ago and excavated from Paglicci Cave (ApuliaItaly), were found to be identical to the Cambridge Reference Sequence in HVR1.[5] This once was believed to indicate haplogroup H, but researchers now recognize that CRS can also appear in U or HV.

Distribution[edit]

Haplogroup H is the most common mtDNA haplogroup in Europe.[6] Haplogroup H is found in approximately 41% of native Europeans.[7][8] The haplogroup is also common in North Africa and theMiddle East.[9] The majority of the European populations have an overall haplogroup H frequency of 40%–50%. Frequencies decrease in the southeast of the continent, reaching 20% in the Near East and Caucasus, 17% in Iran, and <10% in the Persian Gulf, Northern India and Central Asia.[1][10]

Subclades[edit]

Among all these clades, the subhaplogroups H1 and H3 have been subject to a more detailed study and would be associated to the Magdalenian expansion from SW Europe c. 13,000 years ago:[3]

H1[edit]

H1 encompasses an important fraction of Western European mtDNA, reaching its local peak among contemporary Basques (27.8%) and appearing at a high frequency among other Iberians andNorth Africans. Its frequency is above 10% in many other parts of Europe (France, Sardinia, British Isles, Alps, large portions of Eastern Europe), and above 5% in nearly all the continent.[1] Its subclade H1b is most common in eastern Europe and NW Siberia.[11] So far, the highest frequency of H1 - 61%- has been found among the Tuareg of the Fezzan region in Libya.[12][13]
Frequencies of haplogroup H1 in the world (Ottoni et al. 2010)
Region or PopulationH1%No. of subjects
Africa
Libyan Tuareg61129
Tuareg (West Sahel)23.390
Berbers (Morocco)20.2217
Morocco12.2180
Berbers (Tunisia)13.4276
Tunisia10.6269
Mozabite9.880
Siwas (Egypt)1.1184
Western Sahara14.8128
Mauritania6.9102
Senegal0100
Fulani (Chad-Cameroon)0186
Cameroon0142
Chad077
Buduma (Niger)030
Nigeria069
Ethiopia082
Amhara (Ethiopia)090
Oromo (Ethiopia)0117
Sierra Leone0155
Guineans (Guiné Bissau)0372
Mali083
Kikuyu (Kenya)024
Benin0192
Asia
Central Asia0.7445
Pakistan0100
Yakuts1.758
Caucasus
Caucasus (north)8.868
Caucasus (south)2.3132
Northwestern Caucasus4.7234
Armenians2.3175
Daghestan2.5269
Georgians1193
Karachay-Balkars4.4203
Ossetians2.4296
Europe
Andalusia24.3103
Basques (Spain)27.8108
Catalonia13.9101
Galicia17.7266
Pasiegos (Cantabria)23.551
Portugal25.5499
Spain (miscellaneous)18.9132
Italy (north)11.5322
Italy (center)6.3208
Italy (south)8.7206
Sardinia17.9106
Sicily1090
Finland1878
Volga-Ural Finnic speakers13.6125
Basques (France)17.540
Béarnaise14.827
France12.3106
Estonia16.7114
Saami057
Lithuania1.7180
Hungary11.3303
Czech Republic10.8102
Ukraine9.9191
Poland9.386
Russia13.5312
Austria10.62487
Germany6100
Romania9.4360
Netherlands8.834
Greece (Aegean islands)1.6247
Greece (mainland)6.379
Macedonia7.1252
Albania2.9105
Turks3.3360
Balkans5.4111
Croatia8.384
Slovaks7.6119
Slovak (East)16.8137
Slovak (West)14.270
Middle East
Arabian Peninsula094
Arabian Peninsula (incl. Yemen, Oman)0.8493
Druze3.458
Dubai (United Arab Emirates)0.4249
Iraq1.9206
Jordanians1.7173
Lebanese4.2167
Syrians0159

H3[edit]

H3 represents a smaller fraction of European genome than H1 but has a somewhat similar distribution with peak among Basques (13.9%), Galicians (8.3%) and Sardinians (8.5%). Its frequency decreases towards the northeast of the continent, though.[1] Studies have suggested haplogroup H3 is highly protective against AIDS progression.[14]
The remaining subclades are much less frequent:

H5[edit]

H5 may have evolved in West Asia, where it is most frequent and diverse in the Western Caucasus, but its subclade H5a has a stronger representation in Europe, though at low levels.[15]

H2, H6 and H8[edit]

These haplogroups are somewhat common in Eastern Europe and the Caucasus.[3] They may be the most common H subclades among Central Asians and have also been found in West Asia.[11] H2a5 has been found only in Basque Country, Spain.[16]

H4, H7 and H13[edit]

These haplogroups are present in both Europe and West Asia, H13 being also found in the Caucasus. They are quite rare.[3] H4 is often found in Iberia.[16]

H11[edit]

H11 is commonly found in Central Europe.[16]

H18[edit]

H18 occurs on the Arabian Peninsula. [17]

H20 and H21[edit]

These haplogroups are both found in the Caucasus region.[15] H20 also appears at low levels in the Iberian Peninsula (less than 1%), Arabian Peninsula (1%) and Near East (2%).[17]

Tree[edit]

This phylogenetic tree of haplogroup H subclades is based on the paper by Mannis van Oven and Manfred Kayser Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation[2] and subsequent published research.

Popular culture[edit]

In his popular book The Seven Daughters of EveBryan Sykes named the originator of this mtDNA haplogroup HelenaStephen Oppenheimer uses the very similar name Helina in his book The Origins of the British.

See also[edit]


 Mitochondrial Eve (L)  
L0L1-6
L1L2L3

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